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trans-proteomic pipeline  (SourceForge net)

 
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    SourceForge net trans-proteomic pipeline
    Trans Proteomic Pipeline, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/trans-proteomic+pipeline/pmc08822486-104-24-27?v=SourceForge+net
    Average 90 stars, based on 1 article reviews
    trans-proteomic pipeline - by Bioz Stars, 2026-08
    90/100 stars

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    Image Search Results


    Proteomic study. Overview of the main detected proteins in esophageal tubules (ETs) and patches (EPs) decellularized with Protocols Nos. 1 (ET1, EP1), 2 (ET2, EP2) and 3 (ET3, EP3). (Green: positive protein expression; red: negative protein expression).

    Journal: Cells

    Article Title: Bio-Engineered Scaffolds Derived from Decellularized Human Esophagus for Functional Organ Reconstruction

    doi: 10.3390/cells11192945

    Figure Lengend Snippet: Proteomic study. Overview of the main detected proteins in esophageal tubules (ETs) and patches (EPs) decellularized with Protocols Nos. 1 (ET1, EP1), 2 (ET2, EP2) and 3 (ET3, EP3). (Green: positive protein expression; red: negative protein expression).

    Article Snippet: Mass spec data were lock-mass corrected, peak picked, converted into mzML format using Trans Proteomic Pipeline (TPP) and processed with Proteome Discoverer 2.2 (ThermoFisher Scientific).

    Techniques: Expressing

    Journal: Cell Reports

    Article Title: Breast Cancer Classification Based on Proteotypes Obtained by SWATH Mass Spectrometry

    doi: 10.1016/j.celrep.2019.06.046

    Figure Lengend Snippet:

    Article Snippet: Trans-Proteomic Pipeline (TPP) 4.6.0 , ( ) , https://sourceforge.net/projects/sashimi/files/.

    Techniques: Plasmid Preparation, Recombinant, Data-independent acquisition, Mass Spectrometry, Microarray, Sequencing, Software, Hydrophilic Interaction Liquid Chromatography